Doesn't find HyPhy properly

[mojaveazure]

BAD_Mutations does not properly find HyPhy. I have Hyphy installed at /usr/bin/hyphymp, but BAD_Mutations cannot find it.

$ which hyphymp # Done in Docker container
/usr/bin/hyphymp
$ sudo docker run -v $(pwd -P):/data bad-mutations -v DEBUG setup -b /data/BAD_Mutation_database/ -t 'Athaliana' -e 0.05 -c /data/BAD_Mutations_Config.txt
===2017-02-06 22:23:36,289 - LRT_Predict===
DEBUG   setup subcommand was invoked
===2017-02-06 22:23:36,291 - Setup_Env===
DEBUG   Config file in /data/BAD_Mutations_Config.txt
Setting variables: 
#define BASE /data/BAD_Mutation_database/
#define TARGET_SPECIES Athaliana
#define EVAL_THRESHOLD 0.05

===2017-02-06 22:23:36,292 - Setup_Env===
DEBUG   Setting executable path variables:
#define BASH /bin/bash
#define GZIP /bin/gzip
#define SUM /usr/bin/sum
#define TBLASTX /usr/bin/tblastx
#define PASTA /usr/local/bin/run_pasta.py
#define HYPHY 
===2017-02-06 22:23:36,292 - Setup_Env===
WARNING Cannot find HyPhy! Will download
===2017-02-06 22:23:36,292 - Setup_Env===
DEBUG   Checking if /data/BAD_Mutations_Config.txt exists.
===2017-02-06 22:23:36,292 - Setup_Env===
WARNING Config file /data/BAD_Mutations_Config.txt already exists. It will be overwritten!
===2017-02-06 22:23:36,313 - Setup_Env===
INFO    Wrote configuration into /data/BAD_Mutations_Config.txt