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A Survival Guide to Simulations

Wanna start? It is the first week? Copy these files first to your local machine.

git clone --depth 1 https://github.com/VachaLab/C9555.git

Instruction for MUNI students

Before any practical lesson, be sure that the working environment is ready and functional.

First, enter the folder of the course:

cd survival_guide_simulations_c9555/

Then, enter the folder of the corresponding practical, for instance:

cd week01/

Adjust the infinity environment for the needs of the course:

bash ../infinity/infinity-temp.sh

Initiate the uv and jupyter environment with all necessary packages:

bash ../uv/uv-activate.sh

bash ../uv/jupyter-start.sh

Once the jupyter environment is enabled, open the jupyter notebook in your browser via the link popping up on the screen, and you are ready to go!

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