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2,933 changes: 0 additions & 2,933 deletions poetry.lock

This file was deleted.

79 changes: 36 additions & 43 deletions pyproject.toml
Original file line number Diff line number Diff line change
Expand Up @@ -2,35 +2,29 @@
name = "affinis"
version = "0.7.6"
description = "Tools for inferring relations from binary co-occurrence data"
authors = [{ name = "Rachael Sexton", email = "rtbs@nist.gov" }]
requires-python = ">=3.11"
authors = [{name = "Rachael Sexton", email = "rtbs@nist.gov"}]
maintainers = [
{ name = "Rachael Sexton", email = "gh@rtbs.dev"}
]



maintainers = [{ name = "Rachael Sexton", email = "gh@rtbs.dev" }]
keywords = [
"network analysis",
"sparse matrix",
"covariance shrinkage",
"binary data",
"structure learning",
"edge prediction",
"filtering",
"feature learning",
"multi-label",
"graph theory",
"scientific-software",
"tools",
"network analysis",
"sparse matrix",
"covariance shrinkage",
"binary data",
"structure learning",
"edge prediction",
"filtering",
"feature learning",
"multi-label",
"graph theory",
"scientific-software",
"tools",
]

dependencies = [
"scipy~=1.10",
"sparse~=0.15",
"jaxtyping~=0.3",
"plum-dispatch~=2.6",
"contingency-tools~=0.2",
"scipy~=1.10",
"sparse~=0.15",
"jaxtyping~=0.3",
"plum-dispatch~=2.6",
"contingency-tools~=0.2",
]

[project.urls]
Expand All @@ -40,31 +34,30 @@ homepage = "https://data.nist.gov/od/id/mds2-4107"

[dependency-groups]
dev = [
"ipykernel~=6.9.2",
"seaborn~=0.12.1",
"black~=23.3.0",
"ruff~=0.1",
"pytest~=8.3.3",
"toolz~=0.12.0",
"hypothesis~=6.151.5",
"ipykernel~=6.9.2",
"seaborn~=0.12.1",
"black~=23.3.0",
"ruff~=0.1",
"pytest~=8.3.3",
"toolz~=0.12.0",
"hypothesis~=6.151.5",
]

docs = [
# pygraphviz = "^1.11"
"pydlc~=0.2",
"netgraph~=4.12",
"pyvis~=0.3",
"scikit-learn == 1.*",
"pandas >=1.5",
"networkx >=3",
"zensical >=0.0",
"mkdocstrings[python]~=1.0",
"pydlc~=0.2",
"netgraph~=4.12",
"pyvis~=0.3",
"scikit-learn == 1.*",
"pandas >=1.5",
"networkx >=3",
"zensical >=0.0",
"mkdocstrings[python]~=1.0",
]

[tool.pytest.ini_options]
addopts = "--jaxtyping-packages=associations,priors,beartype.beartype"


[build-system]
requires = ["poetry>=0.12"]
build-backend = "poetry.masonry.api"
requires = ["uv_build>=0.11,<0.12"]
build-backend = "uv_build"
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2,320 changes: 2,320 additions & 0 deletions uv.lock

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