Specify a github or local repo, github pull request, arXiv or Sci-Hub paper, Youtube transcript or documentation URL on the web and scrape into a text file and clipboard for easier LLM ingestion
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Updated
Jun 12, 2026 - Python
Specify a github or local repo, github pull request, arXiv or Sci-Hub paper, Youtube transcript or documentation URL on the web and scrape into a text file and clipboard for easier LLM ingestion
📋 A Python Parser for PubMed Open-Access XML Subset and MEDLINE XML Dataset
Fetches PubMed article IDs (PMIDs) from email inbox, then crawls PubMed, Google Scholar and Sci-Hub for respective PDF files.
Get citation counts for a PubMed paper from the command line
A tool for retrieving articles from Scopus. Can work as a standalone application or in conjunction with the author disambiguation application, ReCiter.
BibPMC - add PubMed Central unique identifiers to a BibTeX file
A Python tool for systematic review scraping PubMed articles based on specified search queries.
Grabs and downloads full-text versions of PubMed records in different formats.
Find and validate all Doi(s), Pmid(s) on a string, returning a array of results.
In this project, you will build Orphan Finder: a compact multi-agent workflow (3 agents) that ranks variants via ClinVar, pulls PMID-backed evidence, finds ClinicalTrials.gov matches, and outputs a clinician-ready, logged, reproducible report. Your solution will help turn hours of scattered manual review into a reproducible, source-attributed brief
Provides link of the full-text article upon giving PubMed's PMID
To associate your repository with the pmid topic, visit your repo's landing page and select "manage topics."